Publications from the Department of Biology


Chamberlain KA, Chapey KS, Nanescu SE, Huang JK. J Neurosci. Chamberlain KA, Chapey KS, Nanescu SE, Huang JK. J Neurosci. Creatine enhances mitochondrial-mediated oligodendrocyte survival following demyelinating injury.  2017 Jan 9. pii: 1941-16. doi: 10.1523/JNEUROSCI.1941-16.2016. [Epub ahead of print]. PMID: 28069926

N.G. Hairston Jr. and J.A. Fox, Dormancy and Diapause, In Reference Module in Life Sciences, Elsevier, 2017.


Huang JK, Káradóttir RT. 2016. Oligodendrocytes in health and disease.Neuropharmacology. Nov;110(Pt B):537-538. PMID: 27553122

Li E, Tako Ernest, Singer SM. 2016. Complement Activation by Giardia Parasites through the Lectin Pathway Contributes to Mast Cell Responses and Parasite Control. American society for microbiology. DOI:10.1128/IAI.00074-16.  

Manlik, O., McDonald, J.A., Mann, J. Smith, H., Bejder, L., Krützen, M.K., Connor, R.C., Heithaus, M.R., & Sherwin, W.B. 2016. The relative importance of reproduction and survival for population viability: a case study of two dolphin populations. Ecology and Evolution

Mann, J. & Karniski, C. 2016. Diving beneath the surface: Long term studies of dolphins and whales. Journal of Mammalogy.

Patten, M. M. 2016. Epigenetics: Imprinting evolution in Arabidopsis. Nature Plants, 2, 16152.

Patten M.M., Cowley M, Oakey R, Feil R. 2016. Regulatory links between imprinted genes: evolutionary predictions and consequences. Proceedings of the Royal Society B: Biological Sciences 283: doi:10.1098/rspb.2015.2760.

Psachoulia K, Chamberlain KA, Heo D, Davis SE, Paskus JD, Nanescu SE, Dupree JL, Wynn TA, Huang JK. 2016. IL4I1 augments CNS remyelination and axonal protection by modulating T cell driven inflammation. Brain. Dec;139(Pt 12):3121-3136. PMID: 27797811 

Quach, J., K. Chadee, J. Mead and S. M. Singer (in press) Immunity to Intestinal Protozoa: Entamoeba, Cryptosporidium, and Giardia, in Encyclopedia of Immunology, M. J. H.  Ratcliffe ed. (Elsevier: New York).

Rankin, R., Mann, J., Singh, L.O., Patterson, E.M., Krzyszczyk, E.B., Bejder, L. 2016. Dolphin social structure is driven by weighted and topological information: a null model approach, Animal Behaviour. 113:215-228. 

Rydzewski, W. T., Carioscia, S. A., Liévano, G., Lynch, V. D., & Patten, M. M. 2016. Sexual antagonism and meiotic drive cause stable linkage disequilibrium and favour reduced recombination on the X chromosome. Journal of evolutionary biology, 29(6), 1247-1256.

Singer, S.M.,  J. G. Maloney and C. H. Coelho (in press) Chapter 40: Giardia lamblia, in Laboratory Models For Foodborne Infection. D. Liu ed. (Taylor & Francis: New York).

Singer, S.M. 2016. Control of Giardiasis by IL-17 in Humans and Mice - Are the Questions all Answered? Invited Commentary in Clin Vacc Imm 23:2-5.

Solaymani-Mohammadi, S., O. Lakhdari, I. Minev, S. Shenouda, B. F. Frey, R. Billeskov, S. M. Singer, J. A. Berzofsky, L. Eckmann and M. F. Kagnoff (in press) Lack of the programmed death-1 receptor renders host susceptible to enteric microbial infection through impairing the production of the mucosal natural killer cell effector molecules. J Leuk Biol.

Steidle, E.A., L.S. Chong, M. Wu, E. Crooke, D. Fiedler, A.C. Resnick, and R.J. Rolfes. 2016.  A novel inositol pyrophosphate phosphatase in Saccharomyces cerevisiae: Siw14 protein selectively cleaves the β-phosphate from 5-diphosphoinositol pentakisphosphate (5PP-IP5). J Biol Chem in press

Tosh, K., L. Mittereder, S. Bonne-Annee, S. Hieny, T. B. Nutman, S. M. Singer, A. Sher and D. Jankovic. 2016. The IL-12 response of primary human DC and monocytes to Toxoplasma gondii is stimulated by phagocytosis of live parasites rather than host cell invasion. J Imm. 196: 345-56.

Walker T, Huang J, Young K.  2016. Neural stem and progenitor cells in nervous system function and therapy. Stem Cells International; Volume 2016: 1890568. Published online 2016 Aug 14. Editorial. PMCID: PMC4989086

Wallen, M.M., Patterson, E., Krzyszczyk, E., Mann, J. 2016. Ecological costs to females in a system with allied sexual coercion. Animal Behaviour

Xie T, Vora A, Mulcahey PJ, Nanescu SE, Singh M, Choi DS, Huang JK, Liu CC, Sanders DP, Hahm JI. 2016. Surface assembly configurations and packing preferences of fibrinogen mediated by the periodicity and alignment control of block copolymer nanodomains. ACS Nano. 2016 Aug 23;10(8):7705-20. PMID: 27462904



Belitsky BR, Brinsmade SR, and Sonenshein AL. 2015. Intermediate levels of Bacillus subtilis CodY activity are required for derepression of the branched-chain amino acid permease. BraB. PLoS Genetics 11(10):e1005600

Chamberlain KA, Nanescu SE, Psachoulia K, and Huang JK. 2015. Oligodendrocyte regeneration: its significance in myelin replacement and neuroprotection in multiple sclerosis. Neuropharmacology. pii: S0028-3908(15)30133-7

Chen, X.G., X.T. Jian, J.B. Gu, M. Xu, Y. Wu, Y.H. Deng, C. Zhang, M. Bonizzoni, W. Dermauw, J. Vontas, P. Armbruster, X. Huang*, Y.L. Land, H. Zhang, W.M. He, H.J. Peng, Y.F. Liu, K. Wu, J.H. Chen, L. Lirakis, P. Topalis, T. Van Leeuewen, A.B. Hall, X.F. Jiang, C. Thorpe, R.L. Mueller, C. Sun, R.M. Waterhouse, G.Y. Yan, Z. Tu, X.D. Fang, and A.A. James.  2015.  Genome sequence of the Asian tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics and evolution. Proceedings of the National Academy of Sciences of the United States of America 112:E5907-E5915.

Chen C, Lee GA, Pourmorady A, Sock E, and Donoghue MJ. 2015. Orchestration of Neuronal Differentiation and Progenitor Pool Expansion in the Developing Cortex by SoxC Genes. J Neurosci. 22;35(29):10629-42. doi: 10.1523/JNEUROSCI.1663-15.

Coate TM, Spita NA, Zhang KD, Isgrig KT, and Kelley MW. Elife. 2015. Neuropilin-2/Semaphorin-3F- mediated repulsion promotes inner hair cell innervation by spiral ganglion neurons. 24(4). PMID: 26302206

de la Fuente AG, Errea O, van Wijngaarden P, Gonzalez GA, Kerninon C, Jarjour AA, Lewis HJ, Jones CA, Nait-Oumesms. 2015. provide insight to climate attributes delineating the geographic range of Aedes albopictus (Diptera: Culicidae) prior to worldwide invasion.  Journal of Medical Entomology, 52:647-657.

de la Fuente AG, Oihana E, van Wijngaarden P, Gonzalez GA, Kerninon C, Jarjour A.A, Lewis H.J, Jones C.A., Nait-Oumesmar B., Zhao C, Huang JK, French-Constant C, and Franklin RJ. 2015. Vitamin D receptor-retinoid X receptor heterodimer signaling regulates oligodendrocyte progenitor cell differentiation. J Cell Biol 211.5 (2015): 975-85.

Dimitrov, D., Singh, L., and Mann, J. 2015. Query Operator for Comparing Uncertain Graphs. Transactions on Large-Scale Data- and Knowledge-Centered Systems. TLDKS-DEXA Springer-Verlag.

Elizabeth C. Lee, Cécile Viboud, Lone Simonsen, Farid Khan and Shweta Bansal. 2015. Detecting signals of seasonal influenza severity through age dynamics. BMC Infectious Diseases. DOI: 10.1186/s12879-015-1318-9. 

Gao Y, Xu S, Cui Z, Zhang M, Lin Y, Cai L, Wang Z, Luo X, Zheng Y, Wang Y, Luo O, Jiang J, Neale JH. and Zhong C. 2015.  Mice lacking glutamate carboxypeptidase II develop normally but are less susceptible to traumatic brain injury. Journal of Neurochemistry 134:340-53. 

Ghosh AK, Wangsanut T, Fonzi WA, Rolfes RJ. 2015. The GRF10 homeobox gene regulates filamentous growth in the human fungal pathogen Candida albicans. FEMS Yeast Research 15(8): pii: fov093. DOI: 10.1093/femsyr/fov093. 

Huang, X., Poelchau, M.F., Armbruster, P. 2015. Global transcriptional dynamics of diapause induction in non-blood-fed and blood-fed Aedes albopictus. PLoS Neglected Tropical Diseases. 9:e0003724

Karniski, C., Patterson, E. M., Krzyszczyk, E., Foroughirad, V., Stanton, M., and Mann, J. 2014. Determining cetacean activity budgets: a comparison of surveys and individual focal follows. Marine Mammal Science. 29(3): 548-554. DOI: 10.1111/mms.12198

Maloney, J.G., A. Keselman, E. Li, and S. M. Singer. 2015. Macrophages expressing Arginase 1 and Nitric oxide synthase 2 accumulate in the small intestine during Giardia lamblia infection. Microbes Infect, 17: 462-67.

Mann, J. & Singh, L.O. 2015. Culture, diffusion, and networks in social animals. Emerging Trends in the Social and Behavioral Sciences. (Eds. Robert Scott and Stephen Kosslyn) Hoboken, NJ: John Wiley & Sons. 

Mogi, M., Armbruster, P., Tuno, N., Campos, R., Eritja, R. 2015 Simple Indices Provide Insight to Climate Attributes Delineating the Geographic Range of Aedes albopictus (Diptera: Culicidae) Prior to Worldwide Invasion. National Center for Biotechnology Information. doi: 10.1093/jme/tjv038.

Moyon S, Dubessy AL, Aigrot MS, Trotter M, Huang JK, Dauphinot L, Potier MC, Kerninon C, Melik Parsadaniantz S, Franklin RJ, Lubetzki C. J Neurosci. 2015. Demyelination causes adult CNS progenitors to revert to an immature state and express immune cues that support their migration.Jan 7;35(1):4-20. PMID: 25568099

Nelson, T.M., Apprill, A., Mann, J., Rogers, T.L., & M.V. Brown. 2015. The marine mammal microbiome: current knowledge and future directions. Microbiology Australia. DOI: 10/1071/MA15004. 

Patten MM, Carioscia SA, Linnen CR. 2015. Biased introgression of nuclear and mitochondrial genes: a comparison of diploid and haplodiploid systems. Molecular Ecology 24: 5200–5210. 

Patterson, E. M., Mann, J. 2015. Cetacean Innovation. In Animal Creativity and Innovation: Research and Theory. Innovation (Eds: A. Kaufman and J. Kaufman). Elsevier. Chapter 4, pp. 73-120.

Patterson, E.M., Krzyszczyka., E., Mann J. 2015. Age-Specific foraging performace and reproduction in tool-using wild bottlenose dolphins. Behavioral Ecology. DOI: 10.1093/beheco/arv164.

Patterson, E., Krzyszczyk, E., Mann, J. 2015. Becoming an expert: extended learning in tool-using wild bottlenose dolphins. Behavioral Ecology  00(00), 1–10. doi:10.1093/beheco/arv164

Saritas-Yildirim, B., C.P. Childers, C.G. Elsik, and E.M. Silva. 2015. Identification of REST targets in the Xenopus tropicalis genome. BMC Genomics  16:380. 

Sassi M, Sharma D, Brinsmade SR, Felden B, Augagneur Y. 2015. Genome sequence of the clinical isolate Staphylococcus aureus subsp. aureus Strain UAMS-1. Genome Announc. 3(1):e01584-14 PMC4333674

Úbeda F, Patten MM, Wild G. 2015. On the origin of sex chromosomes from meiotic drive. Proceedings of the Royal Society B: Biological Sciences 282: 20141932. 

Whittington N, Cunningham D, Le TK, De Maria D, Silva EM. 2015. Sox21 regulates the progression of neuronal differentiation in a dose dependent manner. Developmental Biology. 397(2):237-47. 


Brinsmade SR, Alexander EL, Livny J, Stettner AI, Segrè D, Rhee KY, Sonenshein AL. 2014. Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY. Proc Natl Acad Sci U S A.; 111(22):8227-8232.

Clifford MA, Athar W, Leonard CE, Russo A, Sampognaro PJ, Van der Goes MS, Burton DA, Zhao X, Lalchandani RR, Sahin M, Vicini S, Donoghue MJ. 2014. EphA7 signaling guides cortical dendritic development and spine maturation. Proc Natl Acad Sci U S A. 2014 Apr 1;111(13):4994-9. doi: 10.1073/pnas.1323793111.

Cords, M. & Mann J. 2014. Social conflict management in primates: Is there a case for dolphins? In J. Yamagiwa & L. Karczmarski, (Eds.) Primates and Cetaceans: Field Research and Conservation of Complex Mammalian Societies, Springer. Ch 10, 207-212.

Cunningham D, Casey ES. 2014. Spatiotemporal development of the embryonic nervous system of Saccoglossus kowalevskii. Dev Biol. 2014 Feb 1;386(1):252-63

Denlinger, D.L. and Armbruster, P. 2014. Mosquito diapause. Annual Review of Entomology, 59:73-93.

Haig D, Úbeda F, Patten MM. 2014. Specialists and generalists: the sexual ecology of the genome. Cold Spring Harbor Perspectives in Biology 6(9): doi: 10.1101/cshperspect.a017525.

Huang CC, Bose JK, Majumder P, Lee KH, Huang JT, Huang JK, Shen CK. 2014. Metabolism and mis-metabolism of the neuropathological signature protein TDP-43. J Cell Sci;127(Pt 14):3024-38

Li E, Liu M, Singer SM. 2014. Resistance to reinfection in mice as a vaccine model for giardiasis. Hum Vaccin Immunother;10(6):1536-43

Lopatto D, Hauser C, Jones CJ, Paetkau D, Chandrasekaran V, Dunbar D, MacKinnon C, Stamm J, Alvarez C, Barnard D, Bedard JE, Bednarski AE, Bhalla S, Braverman JM, Burg M, Chung HM, DeJong RJ, DiAngelo JR, Du C, Eckdahl TT, Emerson J, Frary A, Frohlich D, Goodman AL, Gosser Y, Govind S, Haberman A, Hark AT, Hoogewerf A, Johnson D, Kadlec L, Kaehler M, Key SC, Kokan NP, Kopp OR, Kuleck GA, Lopilato J, Martinez-Cruzado JC, McNeil G, Mel S, Nagengast A, Overvoorde PJ, Parrish S, Preuss ML, Reed LD, Regisford EG, Revie D, Robic S, Roecklien-Canfield JA, Rosenwald AG, Rubin MR, Saville K, Schroeder S, Sharif KA, Shaw M, Skuse G, Smith CD, Smith M, Smith ST, Spana EP, Spratt M, Sreenivasan A, Thompson JS, Wawersik M, Wolyniak MJ, Youngblom J, Zhou L, Buhler J, Mardis E, Leung W, Shaffer CD, Threlfall J, Elgin SC. 2014. A Central Support System Can Facilitate Implementation and Sustainability of a Classroom-Based Undergraduate Research Experience (CURE) in Genomics.
CBE Life Sci Educ 2014 Winter;13(4):711-23

Mann, J., Patterson, E.M., Newport, C. and Singh, L.O., 2014. Social transmission of foraging tactics in bottlenose dolphins: network and developmental approaches. American Journal of Primatology 76:96 

Mann, J. & Würsig, B. 2014. Observing and quantifying delphinid behavior in the wild: Current problems, limitations and future directions. In J. Yamagiwa & L. Karczmarski, (Eds.) Primates and Cetaceans: Field Research and Conservation of Complex Mammalian Societies, Springer. Ch. 17, pp. 335-344.

Patten MM. 2014. Meiotic drive influences the outcome of sexually antagonistic selection at a linked locus. J Evol Biol 2014 Oct;27(11):2360-70

Patten MM, Ross L, Curley JP, Queller DC, Bonduriansky R, Wolf JB. 2014. The evolution of genomic imprinting: theories, predictions and empirical tests. Heredity (Edinb);113(2):119-28

Poelchau, M.F., Goff, A.*, Huang, X.*, Reynolds, J.A., and Armbruster, P. 2014. An experimental and bioinformatic protocol for RNA-Seq analysis of photoperiodic diapause in the Asian tiger mosquito, Aedes albopictus. Journal of Visualized Experiments, Nov 30;(93):e51961 .

Saritas-Yildirim B, Silva EM. 2014. The role of targeted protein degradation in early neural development. Genesis;52(4):287-99

Shaffer CD, Alvarez CJ, Bednarski AE, Dunbar D, Goodman AL, Reinke C, Rosenwald AG, Wolyniak MJ, Bailey C, Barnard D, Bazinet C, Beach DL, Bedard JE, Bhalla S, Braverman J, Burg M, Chandrasekaran V, Chung HM, Clase K, Dejong RJ, Diangelo JR, Du C, Eckdahl TT, Eisler H, Emerson JA, Frary A, Frohlich D, Gosser Y, Govind S, Haberman A, Hark AT, Hauser C, Hoogewerf A, Hoopes LL, Howell CE, Johnson D, Jones CJ, Kadlec L, Kaehler M, Silver Key SC, Kleinschmit A, Kokan NP, Kopp O, Kuleck G, Leatherman J, Lopilato J, Mackinnon C, Martinez-Cruzado JC, McNeil G, Mel S, Mistry H, Nagengast A, Overvoorde P, Paetkau DW, Parrish S, Peterson CN, Preuss M, Reed LK, Revie D, Robic S, Roecklein-Canfield J, Rubin MR, Saville K, Schroeder S, Sharif K, Shaw M, Skuse G, Smith CD, Smith MA, Smith ST, Spana E, Spratt M, Sreenivasan A, Stamm J, Szauter P, Thompson JS, Wawersik M, Youngblom J, Zhou L, Mardis ER, Buhler J, Leung W, Lopatto D, Elgin SC. 2014. A course-based research experience: how benefits change with increased investment in instructional time. 2014.CBE Life Sci Educ;13(1):111-30

Singh. L.O. & Mann, J. 2014. Modeling social preferences based on social interactions. In Encyclopedia of Social Networks and Data Mining Alhajj, Reda; Rokne, Jon (Eds.)  Springer-Verlag. 2200pps.

Stanton, M. & Mann, J. 2014. Shark Bay bottlenose dolphins: A case study for defining and measuring sociality. In J. Yamagiwa & L. Karczmarski, (Eds.) Primates and Cetaceans: Field Research and Conservation of Complex Mammalian Societies, Springer. Ch. 6, 115-128.

Stanton, M. & Mann, J. 2014. Social Network Analysis: Applications to primate and cetacean societies. In J. Yamagiwa & L. Karczmarski, (Eds.) Primates and Cetaceans: Field Research and Conservation of Complex Mammalian Societies, Springer. CH 19., pp. 345-354.

Tarboush R, Novales Flamarique I, Chapman GB, Connaughton VP. 2014. Variability in mitochondria of zebrafish photoreceptor ellipsoids. Vis Neurosci 2014 Jan;31(1):11-23

Wenqiang C, Lonskaya I, Hebron ML, Ibrahim Z, Olszewski RT, Neale JH, Moussa CE. 2014. Parkin-mediated reduction of nuclear and soluble TDP-43 reverses behavioral decline in symptomatic mice. Hum Mol Genet; 23:4960-4969.


 Arab, A. and G. M. Wimp. 2013. Plant production and alternate prey channels impact the abundance of top predators. OECOLOGIA 173: 331-341. 

Bartelt, L. A., Roche, J., Kolling, G., Bolick, D., Noronha, F., Naylor, C., Hoffman, P., Warren, C., Singer, S., and R.  Guerrant. 2013. Persistent G. lamblia impairs growth in a novel murine-malnutrition model.  J Clin Invest. 123: 2672-84. 

Caravelli, P., Wei, Y., Subak, D., Singh L.O., Mann, J. 2013. Understanding evolving group structures in time-varying networks, IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), Niagara Falls, Canada, August 25-28. 

Dimitrov, D., Singh, L. and Mann, J., 2013, January. Comparison queries for uncertain graphs. In Database and Expert Systems Applications (pp. 124-140). Springer Berlin Heidelberg.

Dowling Z., Armbruster P., LaDeau S.L., DeCotiis M.*, Mottley J.*, Leisnham P.T. 2013. Linking mosquito infestation to resident socioeconomic status, knowledge and source reduction practices in suburban Washington, DC. EcoHealth 10:36-47.

Dowling Z., Ladeau, S.L. Armbruster, P., Biehler, D., Leisnham, P.T. 2013. Socioeconomic status affects mosquito (Diptera:Culicidae) larval habitat type availability and infestation level. Journal of Medical Entomolology, 50:764-772.

Durkee CA, Weiss MR, Uma DB. 2013. Ant mimicry lessens predation on a North American jumping spider by larger salticid spiders. Environ Entomol;40(5):1223-31

Foroughirad, V. & Mann, J. 2013. Human fish provisioning has long-term impacts on the behavior and survival of bottlenose dolphins. Biological Conservation. 160: 242-249.

Gatti JW, Smithgall MC, Paranjape SM, Rolfes RJ, Paranjape M. 2013. Using electrospun poly(ethylene-oxide) nanofibers for improved retention and efficacy of bacteriolytic antibiotics.Biomed Microdevices;15(5):887-93

Janczura KJ, Olszewski RT, Bzdega T, Bacich DJ, Heston WD, Neale JH. 2013. NAAG peptidase inhibitors and deletion of NAAG peptidase gene enhance memory in novel object recognition test.Eur J Pharmacol; 701:27-32.

Krzyszczyk, E., Kopps, A., Bacher, K. Smith, H., Meighan, N. & Mann, J. 2013. A report on six cases of seagrass-associated gastric impaction in bottlenose dolphins (Tursiops sp.). Marine Mammal Science DOI: 10.1111/j.1748-7692.2012.00579.x 

Lehigh KM, Leonard CE, Baranoski J, Donoghue MJ. 2013. Parcellation of the thalamus into distinct nuclei reflects EphA expression and function.
Gene Expr Patterns;13(8):454-63

Mann J, Patterson EM. 2013. Tool use by aquatic animals. Philos Trans R Soc Lond B Biol Sci ;368(1630):20120424

Meulman, E., Seed, A. & Mann, J. 2013. If at first you don’t succeed….Studies of ontogeny shed light on the cognitive demands of habitual tool use. Philosophical Transactions of the Royal Society. 368: 20130050

Moore MS, McCann CD, Jordan JA. 2013. Molecular detection of culture-confirmed bacterial bloodstream infections with limited enrichment time.
J Clin Microbiol;51(11):3720-5

North HA, Clifford MA, Donoghue MJ. 2013. 'Til Eph do us part': intercellular signaling via Eph receptors and ephrin ligands guides cerebral cortical development from birth through maturation. Cereb Cortex ;23(8):1765-73

Patten MM, Ubeda F, Haig D. 2013. Sexual and parental antagonism shape genomic architecture. Proc Biol Sci;280(1770):20131795

Poelchau MF, Reynolds JA, Elsik CG, Denlinger DL, Armbruster PA. 2013. Deep sequencing reveals complex mechanisms of diapause preparation in the invasive mosquito, Aedes albopictus. Proc Biol Sci;280(1759):20130143

Poelchau MF, Reynolds JA, Elsik CG, Denlinger DL, Armbruster PA. 2013. RNA-Seq reveals early distinctions and late convergence of gene expression between diapause and quiescence in the Asian tiger mosquito, Aedes albopictus.J Exp Biol ;216(Pt 21):4082-90

Poelchau MF, Reynolds JA, Denlinger DL, Elsik CG, Armbruster PA. 2013. Transcriptome sequencing as a platform to elucidate molecular components of the diapause response in the Asian tiger mosquito, Aedes albopictus. Physiol Entomol;38(2):173-181

Sharara, H., Singh, L., Getoor, L., Mann, J.  2013. Finding Prominent Actors in Dynamic Affiliation Networks. The Human Journal. 1(1): 1-14.

Solaymani-Mohammadi S, Singer SM. 2013. Regulation of intestinal epithelial cell cytoskeletal remodeling by cellular immunity following gut infection. Mucosal Immunol;6(2):369-78

Tako, E., E. Li, M. Farzad and S. M. Singer. 2013. Transcriptomic Analysis of Host Response to Giardia duodenalis Infection Reveals Redundant Mechanisms for Pathogen Control. mBIO 4: e00660-13.

Tsai, Y.J. & Mann, J. 2013. Dispersal, philopatry and the role of fission-fusion dynamics in bottlenose dolphins. Marine Mammal Science. 29(2) April: 261-279 DOI: 10.1111/j.1748-7692.2011.00559. 

Walder K, Ryan S, Bzdega T, Olszewski RT, Neale JH, Lindgren C. 2013. Immunohistological and electrophysiological evidence that N-acetylaspartylglutamate (NAAG) is a co-transmitter at the vertebrate neuromuscular junction. Eur. J. Neuroscience 37:118-129.

Wimp, G.M., Murphy, S.M., Douglas, M. R., Lewis, D., Gratton, C., Ambikapathi, R., Van-Tull, L., and R.F. Denno. 2013. Predator hunting mode influences patterns of prey use from grazing and epigeic food webs. OECOLOGIA 171: 505-517. 


Braasch, J., Wimp, G.M. and I. Kaplan. 2012. Testing for phytochemical synergism: arthropod community responses to induced plant volatile blends across multiple crops. JOURNAL OF CHEMICAL ECOLOGY 38: 1264-1275. 

Chapman GB, Tarboush R, Connaughton VP. 2012. The effects of rearing light level and duration differences on the optic nerve, brain, and associated structures in developing zebrafish larvae: a light and transmission electron microscope study. Anat Rec (Hoboken) 2012 Mar;295(3):515-31

Kamda JD, Nash TE, Singer SM. 2012. Giardia duodenalis: dendritic cell defects in IL-6 deficient mice contribute to susceptibility to intestinal infection. Exp Parasitol;130(3):288-91

Krzyszczyk, E. & Mann, J. 2012. Why become speckled? Ontogeny and function of speckling in Shark Bay bottlenose dolphins (Tursiops sp). Marine Mammal Science. 28(2):295-307. DOI: 10.1111/j.1748-7692.2011.00483.x 

Manlandro CM,  Palanivel VR, Schorr EB, Mihatov N, Antony AA, Rosenwald AG. 2012. Mon2 is a negative regulator of the monomeric G protein, Arl1. FEMS Yeast Res;12(6):637-50

Mann J, Stanton MA, Patterson EM, Bienenstock EJ, Singh LO. 2012. Social networks reveal cultural behaviour in tool-using [corrected] dolphins. Nature Communications 3:980 DOI:  10.1038/ncomms1983  

Meneses, N., Bailey, J.K., Allan, G.J., Bangert, R.K., Bowker, M.A., Rehill, B.J., Wimp, G.M., Lindroth, R.L., and T.G. Whitham.. 2012. Arthropod community similarity in clonal stands of aspen: A test of the genetic similarity rule. ECOSCIENCE 19:48-58. 

Mogi, M., P. Armbruster and D.M. Fonseca. 2012. Analyses of the northern distributional limit of Aedes albopictus (Diptera: Culicidae) with a simple thermal index. Journal of Medical Entomology, 49:1233-1243.

Murphy, S. M., Wimp, G.M., Lewis, D., and R.F. Denno. 2012. Nutrient presses and pulses differentially impact plants, herbivores, detritivores and their natural enemies. PLoS ONE 7(8): e43929. 

Olszewski, RO Bzdega, T, and Neale, JH. 2012. mGluR3 and not mGluR2 Receptors Mediate the Efficacy of NAAG Peptidase Inhibitor in PCP Model of Schizophrenia. Schizophrenia Research, 136: 160-161.

Olszewski, RO, Janczura, KJ, Ball, SR,  Madore, JC, Lavin, KM, Lee, J C-M, Lee, MJ, Der, EK, Bzdega. T and Neale, JH. 2012. NAAG Peptidase Inhibitors Block Cognitive Deficit Induced by MK-801 and Motor Activation Induced by d-Amphetamine and PCP in Animal Models of Schizophrenia. Translational Psychiatry 2:e145 e-pub July 31.

P. Spaak, J.A. Fox, N.G. Hairston Jr. 2012. Modes and mechanisms of a Daphnia invasion. Proceedings of the Royal Society B 279: 2936-2944.

Patterson EM, Mann J. 2012. Look, no hands! Behavioral and Brain Sciences 35:235-236. 

Reynolds, J.A., M.F. Poelchau, Z. Rahman**, P. Armbruster and D. Denlinger. 2012. Transcript profiling reveals mechanisms for lipid conservation during diapause in in the mosquito, Aedes albopictus. National Center for Biotechnology Information;58(7):966-73. doi: 10.1016/j.jinsphys.

Romanowski K, Zaborin A, Valuckaite V, Rolfes RJ, Babrowski T, bethel C, Olivas A, Zaborina O, Alverdy JC. 2012. Candida albicans isolates from the gut of critically ill patients respond to phosphate limitation by expressing filaments and a lethal phenotype. PLoS One.(1):e30119

S. M. Singer. 2012. Giardiasis, in Immunology of Parasitic Infections, T. Lamb. ed., Wiley-Blackwell: Hoboken, NJ. pp. 139-152.

Sharara, H., Singh, L., Getoor, L., Mann, J.  2012. Stability vs. diversity: Understanding the dynamics of actors in time-varying affiliation networks. In Social Informatics (SocialInformatics), 2012 International Conference on (pp. 1-6). IEEE.

Stanton MA, Mann J. 2012 Early social networks predict survival in wild bottlenose dolphins. PLoS One 7(10): e47508. doi:10.1371/journal.pone.0047508

Stanton MA, Mann J. 2012. mosquito, Aedes albopictus. Journal of Insect Physiology, 58:966-973.

Summa K, Urbanski JM, Zhao X, Poelchau M, Armbruster P. 2012. Cloning and sequence analysis of the circadian clock genes period and timeless in Aedes albopictus (Diptera: Culicidae). J Med Entomol;49(3):777-82

Urbanski J, Mogi M, O'Donnell D, DeCotiis M, Toma T, Armbruster P. 2012. Rapid adaptive evolution of photoperiodic response during invasion and range expansion across a climatic gradient. Am Nat 2012 Apr;179(4):490-500

Yamada, T, Zuo, D, Yamamoto, T, Olszewski, RT, Bzdega, T, Moffett, JR, and Neale, JH. 2012. NAAG Peptidase Inhibition in the Periaqueductal Gray and Rostral Ventromedial Medulla Is Analgesic. Molecular Pain 8:67-78.

Zuo D, Bzdega T, Olszewski RT, Moffett JR, Neale JH. 2012. Effects of N-acetylaspartylglutamate (NAAG) peptidase inhibition on release of glutamate and dopamine in prefrontal cortex and nucleus accumbens in phencyclidine model of schizophrenia. J Biol Chem. 22;287(26):21773-82

Zuo, D, Olszewski, RT, Bzdega, T and Neale JH.  20120. Effects of NAAG peptidase inhibition on release of glutamate and dopamine in the prefrontal cortex and nucleus accumbens in phencyclidine model of schizophrenia.  Journal of Biological Chemistry 287:21773-21782.


Archer TC, Jin J, Casey ES. 2011. Interaction of Sox1, Sox2, Sox3 and Oct4 during primary neurogenesis. Dev Biol;350(2):429-40

Blackiston D, Briscoe AD, Weiss MR. 2011. Color vision and learning in the monarch butterfly, Danaus plexippus (Nymphalidae). J Exp Biol;214(Pt 3):509-20

Childers CP, Reese JT, Sundaram JP, Vile DC, Dickens CM, Childs KL, Salih H, Bennett AK, Hagen DE, Adelson DL, Elsik CG. 2011. Bovine Genome Database: integrated tools for genome annotation and discovery. Nucleic Acids Res; 39(Database issue):D830-4

Fell GL, Munson AM, Croston MA, Rosenwald AG. 2011. Identification of yeast genes involved in K homeostasis: loss of membrane traffic genes affects K uptake. G3 (Bethesda);1(1):43-56

Frère, C.H., Mann, J., Krützen, M., Connor, R., Bejder, L., Sherwin, W.B. 2011. Nature and nurture: a step towards investigating their interactions in the wild. Communicative and Integrative Biology March 4: 192-193. Doi: 10.4161/cib.4.2.14297

Jun-Feng Feng, M.D., Ph.D.; Ken C Van, M.S.; Gene G Gurkoff, Ph.D.; Christina Kopriva, B.S.; Rafal T Olszewski; Minsoo Song; Shifeng Sun; Man Xu; Joseph H Neale, Ph.D.; Po-Wai Yuen; David A Lowe, Ph.D.; Jia Zhou, Ph.D.; Bruce G Lyeth. 2011. Post-injury Administration of NAAG Peptidase Inhibitor Prodrug, PGI-02776, in Experimental TBI. Brain Research 1395:62-73.

Kozikowski, A. and Neale, J. H. 2011. Effective Collaborations: How to Protect Yourself, Your Collaborators, and Your Data. Chem Med Chem 6:411-414.

Munoz-Torres MC, Reese JT, Childers CP, Bennett AK, Sundaram JP, Childs KL, Anzola JM, Milshina N, Elsik CG. 2011. Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera. Nucleic Acids Res;39(Database issue):D658-62

N.G. Hairston, Jr. and J.A. Fox. 2011. Dormancy and Diapause. Encyclopedia of Biodiversity, 2nd Ed. Oxford: Elsevier.

Neale JH, Olszewski RT, Zuo D, Janczura KJ, Profaci CP, Lavin KM, Madore JC, Bzdega T. 2011. Advances in understanding the peptide neurotransmitter NAAG and appearance of a new member of the NAAG neuropeptide family. J Neurochem;118:490-498.

Patterson E.M. & Mann, J. 2011. The Ecological conditions that favor tool use and innovation in wild bottlenose dolphins (Tursiops sp.). PLoS One. 6(7)e22243. doi:10.1371/journal.pone.0022243.

Poelchau, M., J. Reynolds, D. Denlinger, C. Elsik and P. Armbruster. 2011. A de novo transcriptome of the Asian tiger mosquito, Aedes albopictus, to identify candidate transcripts for diapause preparation. BMC Genomics 12(1):619.

Profaci CP, Krolikowski KA, Olszewski RT, Neale JH. 2011. Group II mGluR agonist LY354740 and NAAG peptidase inhibitor effects on prepulse inhibition in PCP and D-amphetamine models of schizophrenia. Psychopharmacology (Berl); 216:235-243.

S. M. Singer. 2011. Immunology of Giardiasis, in Giardia, S. Svard and H. Lujan. Eds., Springer-Verlag: New York. pp. 319-331.

Stanton, M.A., Gibson, Q.A., Mann, J. 2011. When mum’s away: A study of mother and calf ego networks during separations in wild bottlenose dolphins (Tursiops sp.) Animal Behaviour. 82: 405-412. 

Solaymani-Mohammadi S, Singer SM. 2011. Host immunity and pathogen strain contribute to intestinal disaccharidase impairment following gut infection. J Immunol;187(7):3769-75

Wimp, G.M., Murphy, S.M., Lewis, D. and L. Ries. 2011. Do edge responses cascade up or down a multi-trophic food web? ECOLOGY LETTERS 14: 863-870. 

Wroblewska B, Wegorzewska IN, Bzdega T, Neale JH. 2011. Type 2 metabotropic glutamate receptor (mGluR2) fails to negatively couple to cGMP in stably transfected cells. Neurochem Int; 58:176-179.


Adedoyin MO, Vicini S, Neale J.H. 2010. Endogenous N-acetylaspartylglutamate (NAAG) inhibits synaptic plasticity/transmission in the amygdala in a mouse inflammatory pain model. Molecular Pain 6:60-82.

Elsik CG. 2010. The pea aphid genome sequence brings theories of insect defense into question.Genome Biol;11(2):106

Frère, C.H., Krützen, M., Mann, J., Connor, R., Bejder, L., Sherwin, W.B. 2010. Social and genetic interactions drive fitness variation in a wild population of bottlenose dolphins. Proceedings of the National Academy of Sciences 107: 19949-19954 

Frère, C., Krützen, M., Mann, J. Watson-Capps, J.J. Patterson, E. M., Tsai, Y.J., Connor, R., Bejder, L., Sherwin, W.B. 2010. Home range overlap, matrilineal, and biparental kinship drive female associations in bottlenose dolphins. Animal Behaviour. 80(3):481-486. DOI: 10.1016/j.anbehav.2010.06.007 

Frère, C., Krützen M., Kopps, A., Ward, P., Mann, J., Sherwin, W.B. 2010. Inbreeding Tolerance and Fitness Costs in Wild Bottlenose Dolphins. Proceedings of the Royal Society-B. 277(1694): 2667-2673. doi: 10.1098/rspb.2010.0039

Frère, C.H., Krzyszczyk, E., Patterson, E.M., Hunter, S., Ginsburg, A., Mann, J. 2010.Thar she blows! A novel method for DNA collection from cetacean blow. PLoS ONE. 5(8)e12299 

Kesleman, A. and S. M. Singer. 2010. Immunity to Giardiasis, in Immune Response to Parasitic Infections: Protozoa, O. Brandonisio and  E. Jirillo eds., Bentham Science Publishers Inc.: New York. pp.78-97.  

North HA, Karim A, Jacquin MF, Donoghue MJ. 2010. EphA4 is necessary for spatially selective peripheral somatosensory topography. Dev Dyn; 239(2):630-8

O'Donnell D, Armbruster P. 2010. Inbreeding depression affects life-history traits but not infection by Plasmodium gallinaceum in the Asian tiger mosquito, Aedes albopictus. Infect Genet Evol;10(5):669-77

Parvaresh KC, Huber AM, Brochin RL, Bacon PL, McCall GE, Huey KA, Hyatt JP. 2010. Acute vascular endothelial growth factor expression during hypertrophy is muscle phenotype specific and localizes as a striated pattern within fibres.Exp Physiol;95(11):1098-106

Sharara H. Singh L., Getoor L., Mann, J. 2010. Understanding actor loyalty to event-based groups in affiliation networks. Social Network Analysis and Mining. 1: 115-126, DOI: 10.1007/s13278-010-0005-5

Singh. L.O., Bienenstock, E.J. & Mann, J. 2010. What are we missing? Perspectives on social network analysis for observational scientific data. In Handbook of Social Networks: Technologies and Applications, B. Furht (ed.), DOI 10.1007/978-1-4419-7142-5 7, Springer Science & Business Media, LLC. Chptr 7, pp. 147-168.

Solaymani-Mohammadi, S., J. M. Genkinger, C. A. Loffredo and S. M. Singer. 2010. A meta-analysis of the effectiveness of albendazole compared with metronidazole as treatments for infections with Giardia duodenalisPLoS Negl Trop Dis. 4: e682. 

Solaymani-Mohammadi S, Singer SM. 2010. Giardia duodenalis: the double-edged sword of immune responses in giardiasis. Exp Parasitol;126(3):292-7

Thévenon AD, Zhou JA, Megnekou R, Ako S, Leke RG, Taylor DW. 2010. Elevated levels of soluble TNF receptors 1 and 2 correlate with Plasmodium falciparum parasitemia in pregnant women: potential markers for malaria-associated inflammation. J Immunol;185(11):7115-22

Urbanski JM, Aruda A, Armbruster P. 2010. A transcriptional element of the diapause program in the Asian tiger mosquito, Aedes albopictus, identified by suppressive subtractive hybridization. J Insect Physiol;56(9):1147-54

Urbanski JM, Benoit JB, Michaud MR, Denlinger DL, Armbruster P. 2010. The molecular physiology of increased egg desiccation resistance during diapause in the invasive mosquito, Aedes albopictus. Proc Biol Sci;277(1694):2683-92

Wimp, G.M., Murphy, S.M., Finke, D.L., Huberty, A.F. and R.F. Denno. 2010. Increased primary production shifts the structure and composition of a terrestrial arthropod community. ECOLOGY 91: 3303-3311.


Armbruster P, Patel M, Johnson E, Weiss M. 2009. Active learning and student-centered pedagogy improve student attitudes and performance in introductory biology. CBE Life Sci Educ;8(3):203-13

Armbruster P, White S, Dzundza J, Crawford J, Zhao X. 2009. Identification of genes encoding atypical odorant-binding proteins in Aedes albopictus (Diptera: Culicidae). J Med Entomol;46(2):271-80

Chapman GB, Tarboush R, Eagles DA, Connaughton VP. 2009. A light and transmission electron microscope study of the distribution and ultrastructural features of peripheral nerve processes in the extra-retinal layers of the zebrafish eye.Tissue Cell;41(4):286-98

Gibson, Q.A. & Mann, J. 2009. Do sampling method and sample size affect basic measures of dolphin sociality? Marine Mammal Science, 25:187-198. DOI: 10.1111/j.1748-7692.2008.00242.x

Kamda JD, Singer SM. 2009. Phosphoinositide 3-kinase-dependent inhibition of dendritic cell interleukin-12 production by Giardia lamblia.
Infect Immun;77(2):685-93

Mann, J. 2009. Parental behavior. In W. F. Perrin, B. Würsig, & H. G. M. Thewissen (Eds.) Encyclopedia of Marine Mammals. Academic Press. Pp. 830-835

Mann, J. & Sargeant, B.L. 2009. Tool-use in Wild Bottlenose Dolphins. In W. F. Perrin, B. Würsig, & H. G. M. Thewissen (Eds.) Encyclopedia of Marine Mammals. Academic Press. Pp. 1171-1173.

N.G. Hairston, Jr. and J.A. Fox. 2009. Egg Banks. In: G.E. Likens (ed.), Encyclopedia of Inland Waters, vol. 3: 659-666. Oxford: Elsevier. 

North HA, Zhao X, Kolk SM, Clifford MA, Ziskind DM, Donoghue MJ. 2009. Promotion of proliferation in the developing cerebral cortex by EphA4 forward signaling. Development;136(14):2467-76

O'Donnell*, D.L. and P. Armbruster. 2009. Evolutionary differentiation of fitness traits across local and regional geographic scales in the Asian tiger mosquito, Aedes albopictus. Annals of the Entomological Society of America, 102:1135-1144.

Rogers CD, Moody SA, Casey ES. 2009. Neural induction and factors that stabilize a neural fate. Birth Defects Res C Embryo Today;87(3):249-62

Rogers CD, Harafuji N, Archer T, Cunningham DD, Casey ES. 2009. Xenopus Sox3 activates sox2 and geminin and indirectly represses Xvent2 expression to induce neural progenitor formation at the expense of non-neural ectodermal derivatives. Mech Dev;126(1-2):42-55

S. M. Singer and J. D. Kamda. 2009. Immune Response to Giardia infection:  Lessons from Animal Models, in Proceedings of the International Giardia and Cryptosporidium Conference II. ed. Ortega- Pierres, G. CAB International: Oxfordshire, UK. pp. 451-462. 

Sargeant, B.L & Mann, J. 2009. Developmental evidence for foraging traditions in wild bottlenose dolphins. Animal Behaviour, 78:715-721.    

Sargeant, B.L. and Mann, J. 2009. From social learning to culture: Intrapopulation variation in bottlenose dolphins. In K. N. Laland & B.G. Galef Jr. (Eds.) The Question of Animal Culture. Harvard University Press. Ch. 7, Pp 152-173.

Sharara H. Singh L., Getoor L., Mann, J. 2009. The dynamics of actor loyalty to groups in affiliation networks. In Social Network Analysis and Mining, 2009. ASONAM'09. International Conference on Advances in (pp. 101-106). IEEE. 

Thévenon AD, Leke RG, Suguitan AL Jr, Zhou JA, Taylor DW.2009. Genetic polymorphisms of mannose-binding lectin do not influence placental malaria but are associated with preterm deliveries. Infect Immun;77(4):1483-91