Publications in 2014

Aiello, C. M., Nussear, K. E., Walde, A. D., Esque, T. C., Emblidge, P. G., Sah, P., … & Hudson, P. J. (2014). Disease dynamics during wildlife translocations: disruptions to the host population and potential consequences for transmission in desert tortoise contact networks. Animal Conservation, 17, 27-39.

Arora, G., Russell, J., Rosenwald, A.. Leaving the science behind: A failure resulting from poor curriculum design. Journal of Interactive Technology and Pedagogy

Brinsmade, S. R., Alexander, E. L., Livny, J., Stettner, A. I., Segrè, D., Rhee, K. Y., & Sonenshein, A. L. (2014). Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY. Proceedings of the National Academy of Sciences, 111(22), 8227-8232.

Cords, M., & Mann, J. (2014). Social conflict management in primates: is there a case for dolphins?. In Primates and Cetaceans (pp. 207-212). Springer, Tokyo.

Cunningham, D., & Casey, E. S. (2014). Spatiotemporal development of the embryonic nervous system of Saccoglossus kowalevskii. Developmental Biology, 386(1), 252-263.

Daniele, S. G., Edwards, A. A., & Maguire-Zeiss, K. A. (2014). Isolation of cortical microglia with preserved immunophenotype and functionality from murine neonates. Journal of Visualized Experiments, (83), e51005.

Denlinger, D. L., & Armbruster, P. A. (2014). Mosquito diapause. Annual Review of Entomology, 59, 73-93.

Diamond, S. E., Cayton, H., Wepprich, T., Jenkins, C. N., Dunn, R. R., Haddad, N. M., & Ries, L. (2014). Unexpected phenological responses of butterflies to the interaction of urbanization and geographic temperature. Ecology, 95(9), 2613-2621.

Diffendorfer, J. E., Loomis, J. B., Ries, L., Oberhauser, K., Lopez‐Hoffman, L., Semmens, D., … & Wiederholt, R. (2014). National valuation of monarch butterflies indicates an untapped potential for incentive‐based conservation. Conservation Letters, 7(3), 253-262.

Haig, D., Ubeda, F., & Patten, M. M. (2014). Specialists and generalists: the sexual ecology of the genome. Cold Spring Harbor Perspectives in Biology, 6(9), a017525.

Huang, C. C., Bose, J. K., Majumder, P., Lee, K. H., Huang, J. T. J., Huang, J. K., & Shen, C. K. J. (2014). Metabolism and mis-metabolism of the neuropathological signature protein TDP-43. Journal of Cell Science, 127(14), 3024-3038.

Johnson, S.S. (2014) O-Rings. In The Best American Science and Nature Writing (pp. 107-114). Houghton Mifflin Harcourt, Boston.

Karniski, Caitlin, Eric M. Patterson, Ewa Krzyszczyk, Vivienne Foroughirad, Margaret A. Stanton, and Janet Mann. “A comparison of survey and focal follow methods for estimating individual activity budgets of cetaceans.” Marine Mammal Science 31, no. 3 (2015): 839-852.

Kopps, A. M., Ackermann, C. Y., Sherwin, W. B., Allen, S. J., Bejder, L., & Krützen, M. (2014). Cultural transmission of tool use combined with habitat specializations leads to fine-scale genetic structure in bottlenose dolphins. Proceedings of the Royal Society B: Biological Sciences, 281(1782), 20133245.

Kriel, A., Brinsmade, S. R., Jessica, L. T., Tehranchi, A. K., Bittner, A. N., Sonenshein, A. L., & Wang, J. D. (2014). GTP dysregulation in Bacillus subtilis cells lacking (p) ppGpp results in phenotypic amino acid auxotrophy and failure to adapt to nutrient downshift and regulate biosynthesis genes. Journal of Bacteriology, 196(1), 189-201.

Krützen, M., Kreicker, S., MacLeod, C. D., Learmonth, J., Kopps, A. M., Walsham, P., & Allen, S. J. (2014). Cultural transmission of tool use by Indo-Pacific bottlenose dolphins (Tursiops sp.) provides access to a novel foraging niche. Proceedings of the Royal Society B: Biological Sciences, 281(1784), 20140374.

Li, E., Liu, M., & Singer, S. M. (2014). Resistance to reinfection in mice as a vaccine model for giardiasis. Human Vaccines & Immunotherapeutics, 10(6), 1536-1543.

Mann, J., & Würsig, B. (2014). Observing and quantifying cetacean behavior in the wild: current problems, limitations, and future directions. In Primates and Cetaceans (pp. 335-344). Springer, Tokyo.

Patten, M. M., Ross, L., Curley, J. P., Queller, D. C., Bonduriansky, R., & Wolf, J. B. (2014). The evolution of genomic imprinting: theories, predictions and empirical tests. Heredity, 113(2), 119-128.

Patten, M. M. (2014). Meiotic drive influences the outcome of sexually antagonistic selection at a linked locus. Journal of Evolutionary Biology, 27(11), 2360-2370.

Poelchau, M. F., Huang, X., Goff, A., Reynolds, J., & Armbruster, P. (2014). An experimental and bioinformatics protocol for RNA-seq analyses of photoperiodic diapause in the Asian Tiger mosquito, Aedes albopictus. Journal of Visualized Experiments (93), e51961.

Raft, S., Coate, T. M., Kelley, M. W., Crenshaw III, E. B., & Wu, D. K. (2014). Pou3f4-mediated regulation of ephrin-b2 controls temporal bone development in the mouse. PloS One, 9(10), e109043.

Rosenwald, A. G., Murray, B., Toth, T., Madupu, R., Kyrillos, A., & Arora, G. (2014). Evidence for horizontal gene transfer between Chlamydophila pneumoniae and Chlamydia phage. Bacteriophage, 4(4), e965076.

Sah, P., Singh, L. O., Clauset, A., & Bansal, S. (2014). Exploring community structure in biological networks with random graphs. BMC Bioinformatics, 15(1), 1-14.

Saritas‐Yildirim, B., & Silva, E. M. (2014). The role of targeted protein degradation in early neural development. Genesis, 52(4), 287-299.’

Shaffer, C. D., Alvarez, C. J., Bednarski, A. E., Dunbar, D., Goodman, A. L., Reinke, C., … & Bazinet, C. (2014). A course-based research experience: how benefits change with increased investment in instructional time. CBE—Life Sciences Education, 13(1), 111-130.

Singh, L.O., Mann, J. (2014) Modeling social preferences based on social interactions. In: Encyclopedia of Social Networks and Data Mining. Springer-Verlag, New York, New York.

Stanton, M., Mann, J. (2014) Social Network Analysis: Applications to primate and cetacean societies. In Primates and Cetaceans: Field Research and Conservation of Complex Mammalian Societies. pp. 345-354, Springer, New York. 

Stanton, M., Mann, J. (2014) Shark Bay bottlenose dolphins: A case study for defining and measuring

sociality. Applications to primate and cetacean societies. In Primates and Cetaceans: Field Research and Conservation of Complex Mammalian Societies. pp. 345-354, Springer, New York. 

Tsai, Y. J. J., Barrows, E. M., & Weiss, M. R. (2014). Pure Self‐Assessment of Size During Male–Male Contests in the Parasitoid Wasp N asonia vitripennis. Ethology, 120(8), 816-824.

Tsai, Y. J. J., Barrows, E. M., & Weiss, M. R. (2014). Why do larger and older males win contests in the parasitoid wasp Nasonia vitripennis?. Animal Behaviour, 91, 151-159.