Publications in 2015

Belitsky, B. R., Brinsmade, S. R., & Sonenshein, A. L. (2015). Intermediate levels of Bacillus subtilis CodY activity are required for derepression of the branched-chain amino acid permease, BraB. PLoS Genet, 11(10), e1005600.

Carroll, I. T., & Bansal, S. (2016). Livestock market data for modeling disease spread among US cattle. bioRxiv, 021980.

Cayton, H. L., Haddad, N. M., Gross, K., Diamond, S. E., & Ries, L. (2015). Do growing degree days predict phenology across butterfly species?. Ecology, 96(6), 1473-1479.

Cepero, L. C., Rosenwald, L. C., & Weiss, M. R. (2015). The relative importance of flower color and shape for the foraging monarch butterfly (Lepidoptera: Nymphalidae). Journal of Insect Behavior, 28(4), 499-511.

Chen, X. G., Jiang, X., Gu, J., Xu, M., Wu, Y., Deng, Y., … & Armbruster, P. (2015). Genome sequence of the Asian Tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics, and evolution. Proceedings of the National Academy of Sciences, 112(44), E5907-E5915.

Coate, T. M., Spita, N. A., Zhang, K. D., Isgrig, K. T., & Kelley, M. W. (2015). Neuropilin-2/Semaphorin-3F-mediated repulsion promotes inner hair cell innervation by spiral ganglion neurons. Elife, 4, e07830.

Daniele, S. G., Béraud, D., Davenport, C., Cheng, K., Yin, H., & Maguire-Zeiss, K. A. (2015). Activation of MyD88-dependent TLR1/2 signaling by misfolded α-synuclein, a protein linked to neurodegenerative disorders. Science signaling, 8(376), ra45-ra45.

Dinsdale, E., Elgin, S. C., Grandgenett, N., Morgan, W., Rosenwald, A., Tapprich, W., … & Pauley, M. A. (2015). NIBLSE: A network for integrating bioinformatics into life sciences education. CBE—Life Sciences Education, 14(4), le3.

Eames, K., Bansal, S., Frost, S., & Riley, S. (2015). Six challenges in measuring contact networks for use in modelling. Epidemics, 10, 72-77.

de la Fuente, A. G., Errea, O., van Wijngaarden, P., Gonzalez, G. A., Kerninon, C., Jarjour, A. A., … & Huang, J. K. (2015). Vitamin D receptor–retinoid X receptor heterodimer signaling regulates oligodendrocyte progenitor cell differentiation. Journal of Cell Biology, 211(5), 975-985.

Funk, S., Bansal, S., Bauch, C. T., Eames, K. T., Edmunds, W. J., Galvani, A. P., & Klepac, P. (2015). Nine challenges in incorporating the dynamics of behaviour in infectious diseases models. Epidemics, 10, 21-25.

Ghosh, A. K., Wangsanut, T., Fonzi, W. A., & Rolfes, R. J. (2015). The GRF10 homeobox gene regulates filamentous growth in the human fungal pathogen Candida albicans. FEMS Yeast Research, 15(8), fov093.

Hannaford, A., Rosenwald, A., Carroll, L.M., Vijh, E., Kelly, B.B. (2015) Case Competitions: a New Frontier in Inter-Professional Health Education? MedEdPublish. pp. 1–14.

Heesterbeek, H., Anderson, R. M., Andreasen, V., Bansal, S., De Angelis, D., Dye, C., … & Hollingsworth, T. D. (2015). Modeling infectious disease dynamics in the complex landscape of global health. Science, 347(6227).

Huang, X., Poelchau, M. F., & Armbruster, P. A. (2015). Global transcriptional dynamics of diapause induction in non-blood-fed and blood-fed Aedes albopictus. PLoS Negl Trop Dis, 9(4), e0003724.

Johnson, S. S., Chevrette, M. G., Ehlmann, B. L., & Benison, K. C. (2015). Insights from the metagenome of an acid salt lake: the role of biology in an extreme depositional environment. PLoS One, 10(4), e0122869.

Kramer, S. C., & Bansal, S. (2015). Assessing the use of antiviral treatment to control influenza. Epidemiology & Infection, 143(8), 1621-1631.

Lee, E. C., Viboud, C., Simonsen, L., Khan, F., & Bansal, S. (2015). Detecting signals of seasonal influenza severity through age dynamics. BMC Infectious Diseases, 15(1), 587.

Maloney, J., Keselman, A., Li, E., & Singer, S. M. (2015). Macrophages expressing arginase 1 and nitric oxide synthase 2 accumulate in the small intestine during Giardia lamblia infection. Microbes and infection, 17(6), 462-467.

Mann, J., & Singh, L. (2015). Culture, diffusion, and networks in social animals. Emerging Trends in the Social and Behavioral Sciences: An Interdisciplinary, Searchable, and Linkable Resource, 1-16.

Mogi, M., Armbruster, P., Tuno, N., Campos, R., & Eritja, R. (2015). Simple indices provide insight to climate attributes delineating the geographic range of Aedes albopictus (Diptera: Culicidae) prior to worldwide invasion. Journal of Medical Entomology, 52(4), 647-657.

Moyon, S., Dubessy, A. L., Aigrot, M. S., Trotter, M., Huang, J. K., Dauphinot, L., … & Lubetzki, C. (2015). Demyelination causes adult CNS progenitors to revert to an immature state and express immune cues that support their migration. Journal of Neuroscience, 35(1), 4-20.

Nelson, T. M., Apprill, A., Mann, J., Rogers, T. L., & Brown, M. V. (2015). The marine mammal microbiome: current knowledge and future directions. Microbiology Australia, 36(1), 8-13.

Ries, L., & Oberhauser, K. (2015). A citizen army for science: quantifying the contributions of citizen scientists to our understanding of monarch butterfly biology. BioScience, 65(4), 419-430.

Oberhauser, K., Ries, L., Altizer, S., Ekstrum, J., Garland, M., Howard, E., Jepsen, S., Lovett, J., Monroe, M., Morris, G., et al. (2015) Citizen scientists and an iconic insect: 70 years and counting. In Monarchs in a changing world: Biology and conservation of an iconic butterfly. Cornell University Press, Ithaca. 

Patten, M. M., Carioscia, S. A., & Linnen, C. R. (2015). Biased introgression of mitochondrial and nuclear genes: a comparison of diploid and haplodiploid systems. Molecular Ecology, 24(20), 5200-5210.

Patterson, E. M., Krzyszczyk, E., & Mann, J. (2016). Age-specific foraging performance and reproduction in tool-using wild bottlenose dolphins. Behavioral Ecology, 27(2), 401-410.

Patterson, E. M., & Mann, J. (2015). Cetacean innovation. In Animal Creativity and Innovation (pp. 73-125). Academic Press.

Pellis, L., Ball, F., Bansal, S., Eames, K., House, T., Isham, V., & Trapman, P. (2015). Eight challenges for network epidemic models. Epidemics, 10, 58-62.

Pomeroy, L. W., Bansal, S., Tildesley, M., Moreno‐Torres, K. I., Moritz, M., Xiao, N., … & Garabed, R. B. (2017). Data‐Driven Models of Foot‐and‐Mouth Disease Dynamics: A Review. Transboundary and Emerging Diseases, 64(3), 716-728.

Quevillon, L. E., Hanks, E. M., Bansal, S., & Hughes, D. P. (2015). Social, spatial, and temporal organization in a complex insect society. Scientific Reports, 5, 13393.

Raguso, R., & Weiss, M. R. (2015). Concerted changes in floral colour and scent, and the importance of spatio-temporal variation in floral volatiles. Journal of the Indian Institute of Science, 95(1), 69-92.

Ries, L., Oberhauser, K., Taron, D., Battin, J., Rendon-Salinas, E., Altizer, S., & Nail, K. (2015). Connecting eastern monarch population dynamics across their migratory cycle. Monarchs in a Changing World: Biology and Conservation of an Iconic Insect. Cornell University Press, Ithaca, NY, 268-281.

Ries, L., Taron, D. J., & Rendón-Salinas, E. (2015). The disconnect between summer and winter monarch trends for the eastern migratory population: Possible links to differing drivers. Annals of the Entomological Society of America, 108(5), 691-699.

Ries, L., & Oberhauser, K. (2015). A citizen army for science: quantifying the contributions of citizen scientists to our understanding of monarch butterfly biology. BioScience, 65(4), 419-430.

Leung, W., Shaffer, C. D., Reed, L. K., Smith, S. T., Barshop, W., Dirkes, W., … & Yuan, H. (2015). Drosophila Muller F elements maintain a distinct set of genomic properties over 40 million years of evolution. G3: Genes, Genomes, Genetics, 5(5), 719-740.

Saritas-Yildirim, B., Childers, C. P., Elsik, C. G., & Silva, E. M. (2015). Identification of REST targets in the Xenopus tropicalis genome. BMC Genomics, 16(1), 380.

Sassi, M., Sharma, D., Brinsmade, S. R., Felden, B., & Augagneur, Y. (2015). Genome sequence of the clinical isolate Staphylococcus aureus subsp. aureus strain UAMS-1. Genome announcements, 3(1).

Taron, D., & Ries, L. (2015). Butterfly monitoring for Conservation. In Butterfly Conservation in North America (pp. 35-57). Springer, Dordrecht.

Úbeda, F., Patten, M. M., & Wild, G. (2015). On the origin of sex chromosomes from meiotic drive. Proceedings of the Royal Society B: Biological Sciences, 282(1798), 20141932.

Whittington, N., Cunningham, D., Le, T. K., De Maria, D., & Silva, E. M. (2015). Sox21 regulates the progression of neuronal differentiation in a dose-dependent manner. Developmental biology, 397(2), 237-247.